YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22726352, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILVTGGAG FIGSAVVRQA VKAGHEVVNL DALTYAACLE NVAEVAQSNL YSFEQADIRD  60
   61 RAALDKIFAL HAPDVVMHLA AESHVDRSID GPSDFVETNI TGTFNMLEAA RKFWAAVGKP 120
  121 GHFRFHHIST DEVYGSLPAD KSVMFTEETA YDPRSPYSAS KASSDHLVRA WHETYGLPVV 180
  181 LTNCSNNYGP YHFPEKLIPV IILNALAGKA LPIYGDGSNI RDWLYVEDHA DALLTVVQKG 240
  241 ENGRSYNIGG ENERSNLELV QTLCEILDQK KPRSDGKSYA EQITFVTDRP GHDARYAIDP 300
  301 SRIRDELGWR PSVTVEEGLA RTVQWYLDNE TWWRALQDRD GVGARLGVKA

Type	Start	End	Confidence
Signal Peptide	1	19	0.83
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	350	0.99