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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14290143
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFLTTLVPLV LAPRPPEEPG SGSHPRLEKL DSLLSDYDIL SLSNIQQHSV RKRDLQSATH  60
   61 LETLLTFSAL KRHFKLYLTS STERFSQNFR VVVVDGKEES EYSVKWQDFF SGHVVGEPDS 120
  121 RVLAHIGDDD VTVRINTDGA EYNIEPLWRF VNDTKDKRML VYKSEDIKDV SRLQSPKVCG 180
  181 YLKADSEELL PEGLIDRQPS EEFVRRVKRR AEPNPLKNTC KLLVVADHRF YKYMGRGEES 240
  241 TTTNYLIELI DRVDDIYRNT SWDNAGFKGY GIQIEQIRIL KSPQEVKPGE RHFNMAKSYP 300
  301 NEEKDAWDVK MLLEQFSFDI AEEASKVCLA HLFTYQDFDM GTLGLAYVGS PRANSHGGVC 360
  361 PKAYYSPGGK KNIYLNSGLT STKNYGKTIL TKEADLVTTH ELGHNFGAEH DPDGLAECAP 420
  421 NEDQGGKYVM YPIAVSGDHE NNKMFSNCSK QSIYKTIESK AQECFQERSN KVCGNSRVDE 480
  481 GEECDPGIMY LNNDTCCNSD CTLKPGVQCS DRNSPCCKNC QFETAQKKCQ EAINATCKGE 540
  541 SYCTGNSSEC PPPGDAEDDT VCLDLGKCKA GKCIPFCKRE QELESCACAD TDNSCKVCCR 600
  601 NLSGPCVPYV DAEQKNLFLR KGKPCTVGFC DMNGKCEKRV QDVIERFWDF IDQLSINTFG 660
  661 KFLADNIVGS VLVFSLIFWI PFSILVHCVD KKLDKQYESL SLFHHSNIEM LSSMDSASVR 720
  721 IIKPFPAPQT PGRLQPLQPV SMMPPVSAAP KLDHQRMDTI QEDPSTDSHV DDDGFEKDPF 780
  781 PNSSAAAKSF EDLTDHPVTR SEKAASFKLQ RQSRVDSKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle