YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7471099
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLPTRQLR DLTVSALGLG CMGMSEFYGD ADEAESLRTL DRALDLGVTF FDTADIYGPY  60
   61 HNEELLGRWL RGKRDRVVLA TKFGIVRDPA DPSRRGFSGR PEYVRQSIEG SLNRLGTDHV 120
  121 DLYYLHRVDP DTPIEDTVGA MADLVQEGKV RALGLSECSA DTLRRAHAVH PISAVQSEYS 180
  181 LWTRDPEENG VLAACRELGV GFVPYSPLGR GFLAGQLKSP DDLAPDDFRR HNPRFQDENF 240
  241 QKNLDLVREI ERLAAEKGCT PSQLALAWVL AQGENLVPIP GTKRVKYLEE NVGALDVRLT 300
  301 PDELRQIDAT FPVAAGDRYP DMRHVNR

Type	Start	End	Confidence
Signal Peptide	1	25	0.76
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	327	0.99