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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11278957
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTFKSILV WVALGIGLMA AFNALDGKKE DNGQIEYSQF IQQVNNGEVS GVNIEGSVVS  60
   61 GYLIKGERTD KSTFFTNAPL DDNLIKTLLD KNVRVKVTPE EKPSALAALF YSLLPVLLLI 120
  121 GAWFYFMRMQ TGGGGKGGAF SFGKSRARLL DKDANKVTFA DVAGCDEAKE EVQEIVDYLK 180
  181 APNRYQSLGG RVPRGILLAG SPGTGKTLLA KAIAGEAGVP FFSISGSDFV EMFVGVGASR 240
  241 VRDMFEQAKK NAPCIIFIDE IDAVGRQRGA GLGGGNDERE QTLNQLLVEM DGFESNQTVI 300
  301 VIAATNRPDV LDPALQRPGR FDRQVVVPLP DIRGREQILN VHSKKVPLDK SVDLLSLARG 360
  361 TPGFSGADLA NLVNEAALFA GRRNKVKVDQ SDFEDAKDKI YMGPERRSMV MHEDEKRATA 420
  421 YHESGHAIVA ESLPFTDPVH KVTIMPRGRA LGLTWQLPER DRISMYKDQM LSQLSILFGG 480
  481 RIAEDIFVGR ISTGASNDFE RATQMAREMV TRYGMSDKMG VMVYAENEGE VFLGRSVTRS 540
  541 QNISEKTQQD IDAEIRRILD EQYQVAYKIL DENRDKMETM CKALMEWETI DRDQVLEIMA 600
  601 GKQPSPPKDY SHNLRENADA AEDNAPHAPT REETEAPAPA DTASTESEQQ PENKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle