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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7436365
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKMKWADMS LDEVLKELKT SRKGLSQDEA SRRLEKYGKN ELVEEKKAGP VKLFLSQFMD  60
   61 ILIILLILAA VASYFVGDVL DSAVILFVVV VNATVGFIQE YRAERAMEKL KGLVSTEAVV 120
  121 IRDGETLRIP ASELTLGDMV IIEEGDNVPA DLRLIETYDL RIDESALTGE SIPVRKTHEN 180
  181 PEDERDVIAF MDSNVVSGRG KGAVIATGME TSMGKIARMI QEDEGKTPLQ EKIISLGKNL 240
  241 GLIAVVVCAL VFAIQFLRGL PLVDTFMTAV SLAVASVPEG LPAILTLTLA LGMQRMARSN 300
  301 AIVRRLLAVE TLGSCSVICT DKTGTLTHNR MTVRESELTS PEMALLVCAL CNNATSSEGG 360
  361 VIGDPTDAAI LSFAAEKGYL RDELERKYPR LAEIPLDSTR KRMSTINQLE DGRYLLVKGA 420
  421 PEIILRRCRY IDSGDGVKEL TDEEVERWLS RLNDMTSRAL RVLALAYRKL PDGDDEEKDL 480
  481 VFVGLVGMMD PPRREAADAI ETCKRAGIKV VMITGDHRDT AVAIAHELGL MDNGMALTGR 540
  541 ELDELSDEEF HEIVEDVRVY ARVFPEQKVR IVEALQGRGH VVAMTGDGVN DAPALKKAAI 600
  601 GVAMGSGTDV ARESSDMVLQ DDNFATIVRA VKEGRTIFDN IRRFVKFQLS TNVGAILTIV 660
  661 SASLINLPVP FNPIQILWIN IIMDGPPAQS LGVEPPESDI MLRGPERENI LPGRNLLRII 720
  721 LAGAVMAAGT LGLYMYMLSS GAGIERAMTV AFTVFVVFQI FNVFNCKSRT GLSNRALILA 780
  781 VVASLALQIL VIYLSPLEGI FRTVPLSVVD WVLIVLVASL ILILEAVLRF SDGRNKVKEN 840
  841 RANP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle