YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71910642, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLYSFLAG VLGVIVILTS LSFILQKKSG SGSQSDKLVI YNWGDYIDPA LLKKFTKETG  60
   61 IEVQYETFDS NEAMYTKIKQ GGTTYDIAVP SDYTIDKMIK ENLLNKLDKS KLVGMDNIGK 120
  121 EFLGKSFDPQ NDYSLPYFWG TVGIVYNDQL VDKAPMHWED LWRPEYKNSI MLIDGAREML 180
  181 GVGLTTFGYS VNSKNLEQLQ AAERKLQQLT PNVKAIVADE MKGYMIQGDA AIGITFSGEA 240
  241 SEMLDSNEHL HYIVPSEGSN LWFDNLVLPK TMKHEKEAYA FLNFINRPEN AAQNAAYIGY 300
  301 ATPNKKAKAL LPDEIKNDPA FYPTDDIIKK LEVYDNLGSR WLGIYNDLYL QFKMYRK

Type	Start	End	Confidence
Signal Peptide	1	22	0.71
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	357	0.98