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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM1_NEUCR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYNEKNGGG IPPVPLSLNT ATPWQNVNLH NDQQTEPQLK SHPDTDPRIT PYLGLRARLS  60
   61 QLWFNRWTIL LILVLIRVII LTANLKENLG DAKAKALSAC TKVEDVGSAM ASMPYYMSKG 120
  121 VNVMAAGSMQ KAVEAMASVL KMILTGVQAI IMFVINMYIG TFACLVAAFI HGGLHVATAV 180
  181 VEGATKVMND AISSITKGIT DDMKSFQSAI DKARDFINSG IGLISKDIQL PTINIDSHIR 240
  241 DLQGIKINAN GVVNGLDVLD QKIPTFDEAK NLTESALAIP FNLVKGKIDT AFSEFTIEPT 300
  301 IFPTAEKQAL SFCSNNSFLN DFFESLITLV YKAKIAFLVV IIILALLAIF VMGYIEYRGF 360
  361 KRERERAARM DANAFNSQDA IYIASRRWTA DGGMRLAKWW TKDTDSKNYL LIRWAFAYAT 420
  421 SLPALFVLSL AVAGMLSCLF QWVLLRQIEK KAPELAAQVG DFAGDVVGTL KQVSNNWANS 480
  481 SNAVVANMES DINSDLFGWV REATESVNNT LTVLDDQIDH ALVAVFNGTV LLDTARDVVG 540
  541 CLIGRKIDAV QDGLTWVHDH AKVTLPRFDD DIFSAGAAQS MGSDGDLSSF LAKPGAVTTD 600
  601 EINEAVGKVI RSLRNGVIQE ALITLGLFLT YVIVVLIGVM GALIGWATPG KTRGEGGQQF 660
  661 GGRPPSFHNH NGFDPALAPS NAMVGNPASP HYQNEKFGGG GGMHDVASPA YEEVVYAGRV 720
  721 PVGNTRELIT RYPSHQRTSS YPTVESPDPM PHGDEKVPGY FTPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle