YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3861019, gi\|7...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.27
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCSSYCTSS EYKMSDLVTN LKKIGLEPQH FDDVLYLRKE INKDSDFIEV FFFPFGCVTI  60
   61 WGGDEIQEKI ILSNTDLVRV NKLKEHLSDY IYFEYNTDVE KTFIDEEKNK IILADQSIFA 120
  121 KLSISHALAQ SVKLSVLEQS VSNLIVQTTP IQQELARTGS VSLSKKEILQ QIGILFNERY 180
  181 SISLHSDIFD TPEFFWRRPS YEPLYLMTAE FQDIEIRQNI MNHRLNMIQE LLDILSNDLN 240
  241 YKHSTKLEWI IIILIGLEVI LSLSHTNLFL KIIGAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	248	0.53
Transmembrane Helix	249	270	0.71
Cytoplasmic	271	276	0.27