YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9951874, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQRLPVTVL SGFLGAGKST LLNHVLKNRE NRRVAVIVND MSEINIDGSE VQRDVSLNRA  60
   61 EERLVEMSNG CICCTLREDL LEEVGRLARE GRFDYLLIES TGISEPMPVA ETFTFRDELD 120
  121 RSLSDVARLD TMVTVVDGMN FLRDYQEAAS LASRGETLGE EDQRSITDLL IDQVEFADVI 180
  181 LVSKIDLISS EQREELLAIL RQLNAEAEIL PMVMGQVPLA KILDTGRFDF DRAASAPGWL 240
  241 KELRGEHLPE TEEYGIASMA YRARRPFHPA RFHAFLHNPL KQGRLLRSKG FFWLASRPRE 300
  301 AGSWSQAGGL MRYGLAGRWW RFVPTGQWPQ DEEGLRAIMR HWEEGVGDCR QELVFIGQNL 360
  361 DFAALRAALD ACLLDDAEMN LGIPGWQGLD DPFEDWGHAA

Type	Start	End	Confidence
Signal Peptide	1	19	0.70
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	400	0.99