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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|107104333
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAGGSGVAS LRGVSLRYGE TRAVDDVSLE IPANRMVGLI GPDGVGKSSL LALLAGARKM  60
   61 QDGEIRVLDG DMRDRRHRRA VCPRIAYMPQ GLGKNLYPTL SVFENVDFFG RLFGHDKAER 120
  121 ERRIADLLQS TGLAPFAERP AGKLSGGMKQ KLGLCCALIH DPDLLILDEP TTGVDPLSRN 180
  181 QFWELIGRIR AGREGMSVLV ATAYMEEAER FDWLVAMDDG KVLATGTPQE LRERTGTQSL 240
  241 ESAFIALLPE SKRAGHHRLV IPPRPQSEGA PRIAIEAEGL TCRFGDFVAV DHVSFRIERG 300
  301 EIFGFLGSNG CGKSTTMKML TGLLPASEGT CALFGQPVDA SDMATRRRVG YMSQAFSLYA 360
  361 ELSVRQNLVL HARLFHLPAD GIPARVGEML RRFDLEKVAD ELPNDLPLGI RQRLSLAVAV 420
  421 IHKPEILILD EPTSGVDPVA RDGFWELMVE LSRRDGVTIF ISTHFMNEAQ RCDRISLMHA 480
  481 GKVLASDTPD ELVRQRGLPT LEATFIAYLE EAAGAAAPAQ PAEAPAVAEQ PGDGQERQAQ 540
  541 RERFSPLRLF SYARREAMEL RRDPIRLTLA LLGTALLMFI IGYGINMDVE DLSWAVLDRD 600
  601 QTTTSQAYAL NIAGSRYFVE HAPITDPDDL DRRLRSGELS LAVEIPPNFG RDLKRGSDPA 660
  661 IGVWIDGAMP TRANTVLGYV QGLHTSYLAD LSRQAGGAEA SAAASTEVRY RYNPDVESLK 720
  721 AMVPAVIPLL LIMIPAMLTA LGVVREKELG SITNLYVTPV TRLEFLVGKQ LPYVAMGMIN 780
  781 FLLMLVLAIV VFRVPLKGSF LALTIGAFLY VVTSTGLGLF LSTFMRSQIA AVFGVAIATM 840
  841 IPAIQFSGLI HPVSSLEGAA AWIGKLYPTS HFLVVSRGAF SKSLGLSDLW AYYLPLAASI 900
  901 VVLTLLSVAC LKKQED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle