YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9951460, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTANSETPA GNPKRKRWLL ILLAMIVLAT LASVAWEFFY GRWHEDTDDA YINGNVVQIT  60
   61 PQIVGTVVSI GADDGDLVRK GQELVRFDPS DADIALQRAE ANLAHTVRQV RGLFSNVDGY 120
  121 RAEVATRKVA LAKAEADYKR RKNLADDGAI SQEELAHARD ALDSAKASLT SSEQQLNTNR 180
  181 ALVDDTQITS HPDVKAAAAQ LRQAYLDDAR STIVAPVTGY VAKRSVQVGQ RVQPGNALMA 240
  241 VVPLDQIWID ANFKETQLKH MRIGQPVEIR SDLYGSDVRY SGTVDSLGVG TGSAFSLLPA 300
  301 QNATGNWIKI VQRVPVRIHI DPQELQKHPL RIGLSMDVKV DLHDQSGPAL AQQPPREALF 360
  361 STDVYQQQLA SADKLIERLI EANLAEDHGK TAQR

Type	Start	End	Confidence
Signal Peptide	1	35	0.87
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	394	0.99