YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53726608, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLVSSTFA LSLSLAIGAA QAEELSGTLK KVADNGTITL GYRDASVPFS YLGDNSGQPM  60
   61 GYSVELAGKV VERLKSTLGK PELKVKYNLV TSQTRIPLVQ NGTVDLECGS TGVTAERQKQ 120
  121 VAFSYGFIYV KGQLLTRKDS GIAHFDDLKG KNVVTTAGTT NERYLKNYNA EHKLGMNVVS 180
  181 AKDHGEAFQM LQSGRAVAFY MDDALLYGER AKARQPHDWV VVGEPQSREI YSCMVRKDDP 240
  241 QFLALVNETL AGLYRSGEIQ GIYQRWFQQP IPPKGLNLEF PMTAELKAIL ENPTSDPVQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	299	0.99