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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|254238513, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.52
Topology Confidence: 0.11
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLI IAAVLVTVMN NFSSPSEPQT LNYSDFIQQV KDGKVERVTV DGYVITGKRS  60
   61 DGDTFKTIRP AIQDNGLIGD LVNNNVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 120
  121 RQMQGGGGGR GGPMSFGKSK ARLLSEDQVK TTFADVAGCD EAKEEVSELV EFLRDPGKFQ 180
  181 RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFD 240
  241 QAKKHAPCII FIDEIDAVGR HRGAGLGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PLGDHVDPAV IARGTPGFSG 360
  361 ADLANLVNEA SLFAARSNKR IVDMREFELA KDKIMMGAER KTMVMSEKEK RNTAYHEAGH 420
  421 AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALESQICS LFGGRIAEEM 480
  481 TLGFEGVTTG ASNDIMRATQ LARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHANV 540
  541 SGETAKMIDQ EVRRIIDDCY GTAKRLLDEN RDKLEMMADA LMKYETIDSD QIDDIMAGRV 600
  601 PREPRDWQGG SGTGTPPANL EESGRRENTP PIGGPAGEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle