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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11351176
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKSIQFSV AALAGASVLS VVVVLVLYAL FAGARTQELV QQRTQGLLEK VINERLVALA  60
   61 RAQVSQIQRE LEYPLTVVHG LANSTRLLGE PGADGMPQLN ASRDEISALL RSTVQNNPKL 120
  121 LDTFMAWEPN AFDTDAAFAG QPGKGYGPDG RYLPWWYRGA DGKPIVEAMA DSIDSEKLLP 180
  181 TGVRENEFYA CPKENKRPCI IDPAPYEMGG KTVMMSSFNV PIMVGDQFRG AVGADLSLAF 240
  241 IQDLLKRADQ QLYDGAGEMA LIASNGRLVA YTRDDSKLGE PAGSVLDGNE VDNLKNLTVD 300
  301 QPLYDIDAEH GHIELFLPFT IADSGVRWTL MLQIPQAAVF GELQQLQGEL SDQRQQDILG 360
  361 MSLAGLVVAA LGLLVVWLVG YGIARPLRQL VGMLDDIAQG EGDLTRRLSS ERADELGSIA 420
  421 KGFNTFLGKL QNMIGQVVQS VQKVSDSSEH TADIAIRTNQ GVQQQLAEIE LVATAVHEMT 480
  481 ATAQDVARNA THAAEAANHA DQAAHQGKQI VESSSAAIQA LASEIGRAVG VVQNLAKDSE 540
  541 NINAILVAIR GIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAQK TQQATEEIQS 600
  601 MIQQLQQGTR DVVKVMQDSQ ERTDDSVRHA RQAAEALESI TQAVSVINDM NTQIASAAEE 660
  661 QSAVAEDINR NVANIGQVAN QVAGGADEAS QASAELTRLA EQQRRLVNQF RV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle