YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PILY1_PSEAE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLHQIGK TSLAAALSGA VLLSAQTTHA AALSVSQQPL MLIQGVAPNM LVTLDDSGSM  60
   61 AFAYAPDSIS GYGNYTFFAS NSFNPMYFDP NTQYKLPKKL TLVNGQVQIQ DYPAPNFSSA 120
  121 WRNGFTRSGS INLSNSYKVT IEYGRGYDKE STIKADAAYY YDFTGSSSCN RTNQACYTRR 180
  181 YVSTEQRQNF ANWYSFYRTR ALATQTAANL AFYSLPENAR VSWQLLNDSN CNQMGSGSSS 240
  241 GNCFSNYLRD FTGQHRVNFF NWLEKLSVNG GTPLRQAMTR AGEFLKKTGV NGPYAYRPGT 300
  301 QTAPEYSCRG SYHILMTDGL WNNDSANVGN ADSTARNLPD GKSYSSQTPY RDGTFDTLAD 360
  361 QAFHYWATDA RPDIDDNIKP YIPYPDQANP SAEYWNPRND PATWQHMVTY TLGLGLTTSL 420
  421 TSPRWEGSTF SGGYNDIVAG NLSWPRASNN DSNNVYDLWH AAVNSRGEFF SADSPDQLVA 480
  481 AFQDILNRIS GKDLPASRPA ISSSLQEDDT GDKLTRFAYQ TSFASDKNWA GDLTRYSLTT 540
  541 QDKATVQTKL WSAQSILDAM PNGGAGRKIM MAGSGTSGLK EFTWGSLSAD QQRQLNRDPD 600
  601 RNDVADTKGQ DRVAFLRGDR RKENSDNFRT RNSILGDIIN SSPATVGKAQ YLTYLAQPIE 660
  661 PSGNYSTFAE AQKTRAPRVY VGANDGMLHG FDTDGNETFA FIPSAVFEKL HKLTARGYQG 720
  721 GAHQFYVDGS PVVADAFFGG AWHTVLIGSL RAGGKGLFAL DVTDPANIKL LWEIGVDQEP 780
  781 DLGYSFPKPT VARLHNGKWA VVTGNGYSSL NDKAALLIID LETGAITRKL EVTGRTGVPN 840
  841 GLSSPRLADN NSDGVADYAY AGDLQGNLWR FDLIAGKVNQ DDPFSRANDG PAVASSFRVS 900
  901 FGGQPLYSAV DSAGAAQAIT AAPSLVRHPT RKGYIVIFGT GKYFENADAR ADTSRAQTLY 960
  961 GIWDQQTKGE AAGSTPRLTR GNLQQQTLDL QADSTFASTA RTIRIASQNP VNWLNNDGST1020
 1021 KQSGWYLDFM VNGTLKGEML IEDMIAIGQV VLLQTITPND DPCADGASNW TYGLDPYTGG1080
 1081 RTSFTVFDLA RQGVVDSKSD YSYNKQNVAV SGTEQKGLGG LTLSTNEQGN PEVCSSGECL1140
 1141 TVNPGPNTRG RQNWRPIEGK N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle