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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15598467, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSIGLIAV VALVYMAILF AIAFYGDRRR TPLSPRLRAW VYSLSLAVYC TSWTFFGAVG  60
   61 QATDQLWSFL PIYLGPVLLM LFAPWVLQKM IMISKQENIT SIADFIAARY GKSQALAVVV 120
  121 ALICMVGVLP YIALQLKGIV LGVNLLIGSG ADSTGTRAQD TALIVSLVLA LFTIVFGTRS 180
  181 LDVTEHHRGM VLAIAFESLV KLTAFLAVGI FATFGLYDGF ADLFSQARAA PQLADYWEET 240
  241 VHWPAMLLQT GVAMTAIMCL PRQFHVTVVE NIEPRDLNLA RWVFPIYLVL AALFVVPIAL 300
  301 AGQLHLPAGV MPDSFVISLP LAEAHPALAL LAFIGGASAA TGMVIVASVA LSTMVSNDML 360
  361 LPWLLRRREK DTERPFEAFR HWLLTVRRVS IAVILLLAYV AYRLLGSSAS LATIGQIAFA 420
  421 AIAQLGPAMI GALYWKQANR RGVFAGLAAG SLLWAYTLVL PVVAKGLGWP LERIPGLTWL 480
  481 ASNPFGLPIE PLTQGVLISL VGNFALFGLV SVLSRTRVSE HWQASRFIGQ EISQRQNSRF 540
  541 MLAVQVEDLL MLAARFVGEE RARQSFIRFA YRQGKGFTPN QTANNEWIAH TERLLAGVLG 600
  601 ASSARAVVKA AIEGREMQVE DVVRIADEAS EVLQFNRALL QGAIENITQG ISVVDQSLRL 660
  661 VAWNHRYLEL FEYPDGLIYV GRPIADIIRY NADRGLCGPG DPDMHVAKRL YWMRQGTPHT 720
  721 SERLFPNGRV IELIGNPMPG GGFVMSFTDI TAYREAEQGL KGANESLEQR VQERTQELSQ 780
  781 LNQELSEAKS NAEAANQSKT RFLAAVSHDL MQPLNAARLF SAALAHQDAL PGEVRDLVQH 840
  841 LDSSLRSAED LITDLLDISR LESGRVSAER NPFPLNNLYD ALGVEFKALA QEQGLHFRLR 900
  901 GSQLRVDSDI KLLRRILQNF LTNAFRYAKG HVLLGVRRED GYLRLEVWDQ GPGIPPDKQK 960
  961 VIFEEFKRLD SHQTRAEKGL GLGLAIADRL CKVLGHPLEV RSWPGKGSVF SVRVPLARQA1020
 1021 PPALANGHKA EPAQALNGAQ VLCVDNEDSI LAGMNSLLSR WGCQVWTARS REECATLLDS1080
 1081 EMRPQLALID YHLDDGETGT QLMAWLRTRL GEPVPGVVIS ADARPELVAE IHAAGLDYLS1140
 1141 KPVKPAALRA LLSRHLSLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle