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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84326982, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLRRLSIQW KITLLAGLCL LGVVALLVGL SVYRMQHSSV LVKSASTQML DESARLRLEA  60
   61 RGELQALRIQ RYFMDAFQYG KGFSRQILFL RDQAQKRFLD AYDLREDLTR QVRTALAANP 120
  121 EVLGLYVVFE PNALDGKDEL FVDQPALGSN DKGRFSLYWA QATPGQLESE SMIESELADT 180
  181 SSGPSGAAYN AWYTCPKESG QPCVLDPYFD KVGERQLLMT SIAFPLELDG KVIGVMGLDI 240
  241 NLSNLQALSE QGNRELYDGV GQVGILSPAG LFAGNSRDAG LLGKNLAKAD PQHAGELLQL 300
  301 LAAGKSRLFN ENDDLKVLQP LQPIPGAKPW GVLLEVPKSA LLGPALALER QLDDMRREGT 360
  361 WVELGLGLGA AVLGLLVLWL SARGVTRPIL GVAHMLRDIA SGEGDLTQRL PHTGRDELGE 420
  421 LAGWFNRFLD KLQPIIRDVK VSVRDARSTA DQSAAISSQT SAGMQQQFRE IDQVATASHE 480
  481 MTATAQDVAR SAAQAADAAR GADQATRDGL ALIDRTTQSI DSLAANLTSA MGQVEQLASS 540
  541 SEEIGSVLEV IRAIAEQTNL LALNAAIEAA RAGDAGRGFA VVADEVRNLA RRTQDSVEQI 600
  601 RGVIEGLQQG TRDVVDAMHG SHRQAQGSVE QVDEAVAALQ RIGEAVTVIN DMNLQIASAA 660
  661 EEQSSVAEEI NRNVAAIRDV TESLSSQAEE SAQVSQSLNR LANHQQGLME QFKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle