YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115584747, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAVNSKRP VNLDLRTIKL PVTAYTSILH RISGVILFLG IAVLLFALDK SLSSEEGFEQ  60
   61 VKACLTSPLA KLVIWGLLSA LLYHLVAGVR HLVMDAGVGE TLEGGKRGSK IVIAIAVVLI 120
  121 VLAGVWVW

Type	Start	End	Confidence
Cytoplasmic	1	27	0.82
Transmembrane Helix	28	48	0.92
Non-Cytoplasmic	49	68	0.82
Transmembrane Helix	69	93	0.79
Cytoplasmic	94	107	0.83
Transmembrane Helix	108	127	0.94
Non-Cytoplasmic	128	128	0.89