YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9947389, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQREIRPSA RAWVRYSLQA VGFLSVALGV IGIFLPVLPT TPFLLLAAAC FMRSSPRFYH  60
   61 WLVGHPRLGP WIRDYLDGEG IPLKGKVYAI GLMWASIALS CYLVRRPWAQ GFMLTSAVLV 120
  121 SIYILRQKTR PPHDA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.90
Transmembrane Helix	16	37	0.88
Non-Cytoplasmic	38	42	0.65
Transmembrane Helix	43	63	0.58
Cytoplasmic	64	82	0.56
Transmembrane Helix	83	104	0.73
Non-Cytoplasmic	105	107	0.51
Transmembrane Helix	108	125	0.68
Cytoplasmic	126	135	0.76