YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11347654
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRNTSSRY GVFSLFLHWG SALVVFGLFG LGLWMRELSY YDPWYHPAPA LHKSIGILLA  60
   61 IALLVRIVWR FVSPPPPAPA NHGPLTRVAS KLGHLALYGL LLAVIVAGYL ISTADGEPIS 120
  121 VFGWFSVPAT LSGLPDQADV AGEIHLYLAW ALVVFAVLHA LAALKHHFVD RDPTLKRMLG 180
  181 RSSNDQQPR

Type	Start	End	Confidence
Cytoplasmic	1	11	0.92
Transmembrane Helix	12	34	0.90
Non-Cytoplasmic	35	49	0.91
Transmembrane Helix	50	70	0.92
Cytoplasmic	71	91	0.90
Transmembrane Helix	92	114	0.90
Non-Cytoplasmic	115	145	0.92
Transmembrane Helix	146	169	0.88
Cytoplasmic	170	189	0.97