YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11348788
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSNGSSSR RTFLRLAALL LPAGALLGSL PGVRAAARPR KLYLAGPDVF RADAVAHGEA  60
   61 LKALCARYGF EGLYPLDNAL PKQLAEPREQ AAWIYRANIG LIERADAVLA NLNFFRGAEP 120
  121 DSGTAFEVGY ATALGKPVYG YVDDAGSYAE RIRRHAPELI GEDPTRDRDG MTLEEFGLPL 180
  181 NLMLAVPATL VVGDAEQALR QLASRRHG

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	208	0.99