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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32422775, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPAAGFSS WRRSPRRSSS VSQYASAQEE IESSSPSKTI PTRPCQDPTS NETHQLYSTS  60
   61 VNSVAHREPL RSFIHGSVRE NLAPLDSYQY AQSVRQDTAE LANYFLSDPK DRQSPAFLDR 120
  121 RRSSISQQTV LGHIAQATGT EDAEEGDGRH QDALNVNISE PLSPETDVES TAEGPSMLTT 180
  181 MLKRSPPSTI YMPASRSDEG YEEDNSWENG EGSRRGSWKH PELVQPTERE AEAADTSDEH 240
  241 APLLRTTSRE AQHDYGMVNG SGHDADIEDQ KSPKRRWTTR LAASARDRWD HIASITKVAA 300
  301 TPKRWDRHAL WKNVIVTPVK CLPAVIVGLL LNILDALSYG MILFPLANPI FSSLGSAGIS 360
  361 IFYISTIISQ LTFSLGSVFK GGVGSELIEV VPFFHSMAGT ITEIVGEDDP EAVIATTITS 420
  421 YALSSMLTGT VFYLMGKFKF GYLVGFIPRH ILIGCIGGVG WFLIATGFEV TARMDGSLNY 480
  481 DLDTLKRLIQ PDTIPLWTVP LGLAIILFYG QTKITSKYFL PLYILTIPAL FYLVLLILGG 540
  541 PDQDTLQKHG WVFEGPPPGE PWWYFYTLYK FQKVDWSAII QCIPAMFALT FFGILHVPIN 600
  601 VPALAQNIGE DHADLDHELK LHGYSNFLSG CFGSIQNYLV YANSVFFMRS GGNTRLAGIM 660
  661 LAVLTFLVMM IGPSLIGFIP VMMVGVLIFD LGFELLIEAV WQPRKKLKWL EYMTVLVIVV 720
  721 VMGTYDFVIG IGVGILCAFA ALIIQTSRIS AVRAIYSGEV VGSTVRRNPT QQHYLRDAGK 780
  781 QVNIIKLAGY LFFGTIVSVE EKIRAMISDE EFNHRPIRFL IIDLWLVNGV DYSAGEVFNT 840
  841 ISRLLNHKGI ELIISGVDTE QELGRHLRAA GLGEDGIDVK LLPELNSALE YCENELLKTL 900
  901 YASQEAGRLP RTAASVPSSS LQVPSTQSSI QPQFDSLGSS PRRSHLQVAA RHALNQQAEQ 960
  961 QRGSTRWQSF KEPLRLMLQI FQDVSNKNED FWFRAVGYFK RLQYPAGTVI FRRGEQAEGF1020
 1021 YLLEQGMLRA EYDLPQGRLC ESIVAGTTCG ELPFFSETTR TATCVVERDC VLWMMDREGW1080
 1081 EKLQKEQPDV AMELLRIGLK LTSERMSVFT SYTLTMAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle