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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85114338
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METVIQDCEP LANYLKGSLT YSLSISKAQH HLLAMTDQGE ETRNNDWPTP PASESDHNGQ  60
   61 FHDAHDDRLS EHSISPPSSP NFAPVGRPMV RKRFRKNAPE PIQLEIPHRM KRYSSLGSLH 120
  121 DSYSVRIFYA QIIGAMCVEL MTFVRGEKKA VTARIDRADN QKFIEQFRYT IVASQLLSGH 180
  181 SVAGLNHFYR NQDADSSKEQ NNDVVLPNST GLVATAAGAL VVALGIRWLC LGGYARLTKK 240
  241 GVLVAVVVAV AVGLVAHFYI RKQWLRYVRN KALAEVATFV AKSQDWDSAT SAALSLVQEV 300
  301 ELVSRGYRLS APLPPISRIE DRSQTRRCGR LRKALKQRFA DMIKSYIQVT TAVKGLSEQL 360
  361 DLEKYYDVYD ITDFDVSDAM QGFPEVATEE AESLRVLKIA AARFHTIRKL LLCALLAFEA 420
  421 TGDNSDFVRW STAAQCLSQL SSLTGDCYER LRLILSDEES FPAIPETKFP LSPNREKRRT 480
  481 QFRKLDSLST GIRGLQAKLA LLREESEKAL NEADDISEVG FDLLSQYESI GQDLKMLQQA 540
  541 WEDGKAALAS GIDRNEKRIS SMSMLYSPAT SLSGLTTVGE ENETGGGAED ALKALTGETS 600
  601 PTRNSSPSPN EPDVFEAVAL SARPRSMLTR EERLVKMKEE REMRAMQREK AEASRGMLKE 660
  661 LEMVINLRPK RHTTMGPGGG NGRSIARRQK RGANNNDEKV SLPVFLKSNN SNNNNNFG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle