YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85091826
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGTQPHVLR LFVAILAAVG LILFFDPLNL GLASSSAIGN FYPTDNRAGG WFMSSTITHI  60
   61 VLFKFKPDAG ADRIKTISNR FLGLKEQCVT MTQQPYIRKI SGGRDNSPEG LQGGLTHAFV 120
  121 VEFESAAERD YYVNLDPVHQ SFKKDIEPFV EKVTVVDFTN GAF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.69
Transmembrane Helix	8	28	0.68
Non-Cytoplasmic	29	47	0.81
Transmembrane Helix	48	65	0.54
Cytoplasmic	66	163	0.57