YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7446791
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVVIPAYN EEENIPVLYE KLKKVLDSLG EDYEIIFVDD GSTDRTPEIL KEIANKDKKV  60
   61 KVIRFRRNYG QTAAIYAGFE HAKGDVIITM DADLQNDPED IPKLLEKMKE GYDIVSGWRK 120
  121 DRKDPFLSRK LPSKIANWII SKVTGVELHD YGCTLKAYKA DIAKMYRLYG DMHRFLPALA 180
  181 KRFGAKITEI PVRHHPRLYG RSKYGIDRTI RVILDIFLVK FLNEYITRPL YVFGGIGFIL 240
  241 FTLGFLIGLY LTVLKLFFGE NIGNRPLLIL GVLLILSGIQ LISTGIIAEL IVRTYYESRG 300
  301 EKPYIIEEKI NFNGVDKDGS NT

Type	Start	End	Confidence
Cytoplasmic	1	229	0.77
Transmembrane Helix	230	253	0.91
Non-Cytoplasmic	254	266	0.66
Transmembrane Helix	267	292	0.84
Cytoplasmic	293	322	0.73