YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7519897
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPFTVLILG ILSALTLYAS ECSVYYKVKK GDSLWKIAKE YKTSIGKLLE LNPKLKNRKY  60
   61 LRPGEKICLK KKISKSKKVV KTKTKTNYKK SYVVYRVKRG DSLIKIAKKF GVSVKEIKRV 120
  121 NKLKGNRIYV GQKLKIPVYK EVKTVKKEQK VYRTTSKYPK VVKERVRKRV IVIYRVRRGD 180
  181 TLIKIAKRFR TSVKEIKRIN RLKGNLIRVG QKLKIPVYRW VYIEKYAKIP KISLAFLPVD 240
  241 GKVVRDKRGV TIYTDCGKPV KAVESGKVIY SGNDISVYGN IVILDHGTYT TVYAYNERNT 300
  301 VKADQKVKKG ETIGYVGIKP DEGRCALHFE IRDKQGNLYN PLMYLSKKK

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	349	0.99