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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32422649, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFLLYIIR MLANPGHSAL LERQTLTSSF PVLLQVAVFS HADVPNNQQH VLSGDESNGA  60
   61 TGNTLPPELP AAQHVQPGAA LVNAALVELR KLHQPLHYKI RKNPGILRTV LHLASKALPA 120
  121 IRLTAPSPAS SHDAVSGPLL HATRLLEESA QKNNSDALYI LGDMNFYGNF SHPRNLKTAF 180
  181 GYYQKLALLN GNSSAMYMMG VMYSTGVGGA VEPDQARALL YYTFAANQGH TRAEMAVAHR 240
  241 HYAGIGTTKN CETAVKYYKR VADKAIAWYR SGPPGGMSWI SESHRIADEL GGTYGVGASV 300
  301 SSSGQNAPHK NPTSDAQASI EDILEYLDLM SQKGDVKATF NLGRIFYDGQ RNLPRDYAKA 360
  361 REYFLKVASK TWNKKGQVFE NKTPSFHTIS CRAAGYIGRM YLRGEGVEQS FRLAEFWFRR 420
  421 GNEQADQQSR HGLGLMYLNG YGVEQNLDLA LKFFNAAAET AYPPSHVQLA ALYLDQGQSD 480
  481 EDIYAANHHL DLAAKYYNME AYYYIGEMTY FGLGRERQCE VALNYYKAVA EKVEPFVSSW 540
  541 AEANLAYEAG EIELAFLEYL HAAEQGYETA QNNVAYILDP QKSYLTIPQW LCPKAQKLTL 600
  601 LQNPTLALIY WTRSSRQGNI DATVKMGDYY LGGIGTDADV DKAVQCYTAA SEHYQSAQAL 660
  661 WNLGWMHENG IGLTQDYHLA KRYYDTALET NDEAYLPVSL SLLKLRARSA WNTFTNGRIN 720
  721 SIQDEPTEKK EWSLSEWINN FLQDEMGYYG DDMYDGYEDA MPGADSDLGA FEEGDILETL 780
  781 VIMGLAAALV FLVLYRQQRQ QAARRQQEDE ARRQPQEQQG QGTLEWVEAD VAVIGRMLAL 840
  841 NDREDPPLQT LMQLPGPAAK RRRVELANAT LRRPFRSPMI NRTPPGDKPT DYTATKQGKT 900
  901 TKLRAAVGSG DGVVDARAEG EEEDDDDDDD EETSFSSVST PAARKASKNS LHYSGASAAG 960
  961 PSTSARRNAK LPILDLSNKQ EQGQEPRATS SGINQKRSRI GSGTSFVSST TSTRPSVDLN1020
 1021 HLARGAVVSE LGPDGSDDIL AGLQKSHRET KVHLVTMQNQ LDLIRQAKRI EIASRTAAVE1080
 1081 ESKELRRQDA TVIDAELKGL VKKWKLASRQ AAEELFELIK GRVADMGGAK AWRETRRRQR1140
 1141 EGFHSAWDDE GQKGKKRKGK GDIDERDIEN SDVSGDEDDD NRRFSQEAGN NDDGNGSVED1200
 1201 NCEDSVRLLW QSLTSWDTIR TKTSGWIRGL ERFAKGKRKR RQERTRGNPG AALWAPTARN1260
 1261 DHLTDQTNGF SPASSQKAKS SRGISIPRHP MCHDSEIISL HPTIRRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle