YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85116624
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKRAAAST LSCITRLGSA PAQSLKTTTT TSRFLNYFVH SYSSQCQRPV PLSPQQQTQQ  60
   61 RGDINYTPIR QKHTIPRPRS QPSSSPEPQS PPSDQQQPAQ PKRDTSQVPQ YELTFTCIPC 120
  121 DHRSKHKVSK QGYHHGSVLI SCPNCRNRHV ISDHLKLFGD RKVTVEDLLK EKGMMVKRGT 180
  181 LGEDGDVEFW EDGTSTMREP EPEPAPERPK KEVDNSPPGS TFKNVRPGEG KKDGDESN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	238	0.99