YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7429922
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKLIVITG GAGFIGSHLA EALKDENDVI IIDNLYSGRI ENIPEGVKFI RADVRDYESI  60
   61 AEVISEADYV FHEAAQISVK ESIEDPVFTE EVNVIGTINV LRALSQGDGK LIFASSAAVY 120
  121 GEPKELPITE DTLTNPISPY GITKLAAEHY CRVYQSLYGI PVVILRYFNV YGPRQSSAYA 180
  181 GVISIFLERA IKGEPLIIFG DGKQTRDFIY VKDVVEANIL VAKKRSANGR IFNVATGKET 240
  241 TILELAMKII DMTSSSSSIL FYPPRPGDIR RSVAKIERIK KLGFKPRYSL EEGLKETFKW 300
  301 FTSRTQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	306	0.99