YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7429847
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVILAAGY GTRMGEKPKG LIKVAGRELI YRTIRNLIKL GITEFIIVTN EKYREFYERF  60
   61 VKENKINAKI IVNQNPERGN GFSLHVAKDY VSGRFVLVMS DHVYEEKFYE LAINGEGLIA 120
  121 DRNPKYVDVE EATKVKIEGM RVVEIGKKLK EWNAVDTGFF ILDDSIFEIT TRLVQEKEVV 180
  181 ELRDVVKEAK LKVTFVDGLF WMDVDTPEEL KKAKKLIVAH SVKGVGDGFI SRYLNRKVST 240
  241 WISSHLVDHV TPNQMTLITF TFGIISALVN FVNIPLAGIL YQISSILDGV DGEIARARMQ 300
  301 TSKFGGYFDS ILDRYVDLSF LLTLAYVSLA DPLWWSVATL AIFSSAMVSY STERFRGAYC 360
  361 ADAYKVIPAL RKIPGKRDER IFTIMIFTLL GWIKALFILL AIWSTLRVII TIYLVRTTLF 420
  421 HES

Type	Start	End	Confidence
Cytoplasmic	1	256	0.84
Transmembrane Helix	257	279	0.83
Non-Cytoplasmic	280	329	0.79
Transmembrane Helix	330	350	0.77
Cytoplasmic	351	380	0.91
Transmembrane Helix	381	404	0.85
Non-Cytoplasmic	405	423	0.78