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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32421857, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSRALGR LSAPSMGVAR LQTQAVSRLL SSAPRRALIS ESRQVAVTQQ IRRAHTETTP  60
   61 LPEPPKERRR FRKLRWLWRA PLFVSLAGIA YVGWGVYEER NPGPQVEPDP SKKTLVVLGT 120
  121 GWGSVSLLKK LDTEHYNVIV ISPRNYFLFT PLLPSCTTGL IEHRSIMEPI RTILRHKKAN 180
  181 VKFYEAEASS VDPERKVVRV LDTSEIRGDV VETEIPYDML VVGVGAENAT FGIPGVREHT 240
  241 CFLKEIGDAQ RIRKKIMDCV ETAAFKGQSQ EEIDRLLHMV VVGGGPTGVE FAGELQDFFE 300
  301 EDIKKLIPDI ADRFRVTLIE ALPNVLPSFS KQLIEYTEST FKEEKIDIMT KTMVKRVTEK 360
  361 TVEAEISKPD GTREKITLPY GLLVWATGNA VRPVVKDLME RIPAQKDSRR GLAVNEYLVV 420
  421 QGTRDIWAVG DCAVAGYAPT AQVASQEGNF LAGLFNNMAR TEVLEQRVRE LSGSLNLAPG 480
  481 NAAEISKEIE EHERQLRRIK DIKPFHYSHQ GSLAYIGSEK AVADVSWFNG NLASGGSLTF 540
  541 LFWRSAYLSM CFSTRNRLLV INDWVKSKLF GRDVSRE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle