YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5457942, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLLIVTFL ALIVFFSGCI GSNSSATPTT TTSPVTQSQP KEVTTETKTV TQTQTVTVTM  60
   61 TRAPTHYPLT ITDSLGRKVT IKKEPQRIVS LAPSITETLY FIGALDKVVG VTSFDDFPPG 120
  121 VQKGRTIIGG FSGPNIEVIA SLKPDLIIGT SMHIKYLDKL EQIAPVIIVD PKNIDEIYEW 180
  181 IIKLGKVVNR EEEAKGVVNY MKAIVEDIKT KTSNASKVKV FFLLSTYGGY WTAGKGTFID 240
  241 SLISIAGGEN IFHDVEGWKQ VSPEEIVARD PEVIIFSAHA GIKPEDLCKT PLAETTAFKN 300
  301 GRAYMVSDDN LVSRPGPRIV LGLEEIAYFI HPEAFNYAYQ AKAAACASS

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	349	0.99