YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5457737, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNKLIVVTG GAGFIGSHIA EALKEENDVV VIDNLYSGKP ENVPEGVKFI EADVRDYESI  60
   61 AEIVSSADYV FHEAAQISVE ESVKDPVFTE EVNVIGTINI LRALSEGNGK LIFASSAAVY 120
  121 GEPTSLPIRE DHPLNPISPY GVSKVSGEHY CKVFYQLYGV PTVILRYFNV YGPRQSSAYA 180
  181 GVISIFMERA LRGEPLVIFG DGKQSRDFVY VKDVVEANIL VAEKRRAEGE TFNVGTGRET 240
  241 TIIELAMKII ELSSTSSQIL FSKPRPGDIR RSVADIEKIK KLGFKPRYSL EEGLLETWKW 300
  301 FKSRTLG

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	307	0.99