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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32421793, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLNIISAR VSPTSSPTPS RSNSISALSL AHHLSSKEED DHHGPRSNDE LLGLANKNNT  60
   61 LSEEPEDKES AAQGGYDGQH YDPDEKTPLL AQDQPKSPTT WASLPKRFAF AIVESIRWLL 120
  121 MTIAAPGLYL VALFYDAEGN FAPTKQLRKL FGRYGGNAKE MAVDYHEAAA LSDANLDGAG 180
  181 IGGSIRKSRK SRLRSSGSSS SGLSSESESE VESRTGSSSS GRRLKSKSSQ DSEEIAPARR 240
  241 SIRIKLHSDA DSLRQRKQRK DRSSASGRST TNSDGNGGSG QQNLSVPGND ISAQLKSPTS 300
  301 PVGALTKYPK TPAPPRPLIP KRQPSYKISA VDPANLKHQK TLILDLDETL IHSMSKGGRM 360
  361 SSGHMVEVRL NTTYVGVGGQ QTIGPQHPIL YYVHKRPHCD EFLRRVSKWY NLVVFTASVQ 420
  421 EYADPVIDWL ESDRKYFSAR YYRQHCTFRH GAFIKDLSSV EPDLSKVMIL DNSPLSYMFH 480
  481 QALLHHGTIR DEEQRSSVIM AWFPFSFASD CYISRLSLAT CMILKSQRAV TQIWYLQDNS 540
  541 EILPPSHSFT PLQRSPPVFE EFSCMNRSRI F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle