YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85092704
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLCGDEPL CMLREETHGV YNQGSAPPGL SSRPLPSSFD DNADFYNENG FQKVSRRLRE  60
   61 EPLIPIGCIA TVAAFTGAYR AMRRGDHEQV QRMFRARVAA QAFTVVAMVA GSWYYAADRQ 120
  121 KQKELWKLKE QQDAEEKRQK WIRELEVRDA EDKALQERLE KRRKKKAERD SAAGAPDGVA 180
  181 AQAQAAYADA KEKVSSPAGD VAPEDPNKSN ITGVRERLPT WLGGSKGADG SSRDKN

Type	Start	End	Confidence
Cytoplasmic	1	61	0.81
Transmembrane Helix	62	82	0.84
Non-Cytoplasmic	83	97	0.71
Transmembrane Helix	98	117	0.91
Cytoplasmic	118	236	0.73