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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_NEUCR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGVIARLM SGGRGARSFY EELRGRDNVS DVDDRAGLLD EENLNQHFND YDLENAEGLR  60
   61 LEDSRATVDG RIPRGRAQLS GRPPRPAATT HWGTSHDDDG DNDVPASLLV ERYDRGAAPL 120
  121 GSPGKPRSQH AGSRAHPAPG LSKGRTHQQR PHIDQELQPP LHSDAAPSSL LAGAITGNAK 180
  181 KMAEWRWANI TNLDSFMQDV YSYYRGSGMW CIVVERVLHL IKVAFVAFLL TFLSQCVDFK 240
  241 KIPSNQKLSQ VLVPQCTRNM SGLWNIGLWL FAFYFMWKSI QYILDLRRLT HVRDFYIHLL 300
  301 NIPDEDMQTI TWQEVVARIM VLRDQNVRTT RTITPQNQRW VLGSQSKERL DASDIANRLM 360
  361 RRENYMIAMI NKDILDLTIP LPILRNRQLL SQTLEWTLMF SILDFVFDPK GQVHQEFLRS 420
  421 DRRGILSAKL RSRFIFAGVM ILILSPFVAG YLIIVYFLEY YNEIQKNPSI LSARSYTPLA 480
  481 EWKFREFNEL PHLFKRRLDM SHPFASHYID QFPKAKTSMV AKTVSFIAGS IATVLALISV 540
  541 FDPEMFLGFE ITHDRTVLFY TAVFGAIWSV ARGSVSEDNA VFDPEYALGN VVEYTHYQPE 600
  601 HWKDRWHSAD VKAEFEELYK LKLVIFIEEI LSILTTPFVL FFSLPKSADQ IIDFFREFTI 660
  661 HVDGLGYVCY FAEFDFKKGS KSQAPAATAG EGDVRDDYYS TKHGKMEASM YGFINNYARN 720
  721 PKHLPPAMRQ QFHLPPVFPG ITSPTLAGDL AASRMGRSQR GRSKGPLPSR TPRPGAVMAE 780
  781 PSPMASILLD PRHQPIFPNN MSFVNTGHQF RGGNQGDGHM MGGGSMEEDV KGAARHGQQT 840
  841 HDDESEDSRA GLDESAWQVS PTKDLSRENS GRGLDSVVGE EAGNGAGVVH MLYQFNQAHL 900
  901 NRRLGGVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle