YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85093576
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRPSSISLR RPARQILFSS VSTIRAAAPV PTTATHRSLS TSTSTGSGCP CANGSRRPQV  60
   61 KQTQELQQQQ QQRQQRQHRN AYHSYDHPSS SAAFTPVEES ILSAAYQHVP SHGFTPSALA 120
  121 AGARDAGYLD ISPTILPEGA FALIRYHLVK QREELAPRVS ELFGGEGHVG ARPGLSEWEI 180
  181 RGRVEAVTWE RLSANAQVIG RWQEALAIMA QPSYVPPSLK ELALLSDEIL FLAGDSSVDP 240
  241 SWYTKRASLS TIYAAAELFM TNDHSPEFMD TRAFLNRRLR EVNEVGGVFR NLREWVGFTA 300
  301 TAGVNVLRSK GVRI

Type	Start	End	Confidence
Signal Peptide	1	34	0.85
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	314	0.99