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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32421373, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCEGEHLLLL LLLLLLLLPL RVCSLHYNLP SRYHIPVACV PTLACVAAMP TLRERPSRGD  60
   61 SSPAKRNTTS SAAAPTRTAA RTTPRTTRRQ SSNTNSNIMA AAPARDAIEV RESIEAKGDV 120
  121 DDDVDMEDAD AKDDEPRKPT DKDQDADMAD DREDDEDEDH DQDEEDEEES DSAKDLLQLI 180
  181 RDTSEYLCRY TIKVDGEDYE IASGFQRLVN KRSLPDYFEV IKTPMAFSTI RGKLGKKSYT 240
  241 SFNEFVQDVT RICHNAQVYN RPSAPIFSDA GRLLEVFKGK LAELVRKGDI TEKDAEIPDY 300
  301 GPLPEFEDSP TPEEEEDEEE EEEEEEESES DDSDAVDSDG RRRRGRRRGG RSRRRKQDDD 360
  361 DDEAQKKHTR PLKVLTPQEA RIQALLKGLR KFKNENGHVR INHFQRLPDK SESPGYYAAV 420
  421 RNPIALDMII RKHKRKKYQY LDQVLQDLEL MFENAKLFHE QGSEEYEDAV ELQKEARALT 480
  481 EQEKAKPDDD FRDADGKLPL DSIEHGGELW RVGDWVHIRN PNDLSKPIVA QIYRMWSDKS 540
  541 GQKWVNACWF YRPEQTVHRY DKFFYENEVV KTGQYRDHRI EEIEDRCFVM FITRYPKGRP 600
  601 RGLPYNKMVY VCEARYNEEK CKFNKVKTWS SCLPEEVRDQ DYEMDLWPVP RTMRKIPSPI 660
  661 KHLLQADAKE TDDLPKPTWR SPNAPPLIGA VHRRPREPNE SPPPEAHPTF IAPVPLAIGP 720
  721 GPGSGSSHRQ SFSGGVPGTP TFHPSVAPAP GPGGHVAFGG QHYVQHFAPR QQQQQQQQQQ 780
  781 QQQQPPPQGH GIAPHIVQIH GHPQSHPPPP IHQYQPQLQP HPHQGLHQQP LGPQHQHQPM 840
  841 PGMPMHVQPH HPGMPPMQPS PHYYPHQQPP SYSHQQPPPY HGPGPQHVPI PQPPHLSPPP 900
  901 PPQQQQLQQQ QQQQLHQPYQ QIQYIHHGPP TTQSQLAPAP PPGPQYDPHH PHSRPVHAHP 960
  961 PPPPPPQQQQ PFGVGLPHHP GVPIGLPVAH HSHSHPQPSP IAPNFPTPNR HHQPPPMGTP1020
 1021 MQQHPPTMPQ QLAPGSAAGN AYNAPRAPEV YTLAENIDSE IPEEVKKQFQ TDDQGRVLFF1080
 1081 TAPPLNRASV RNGGVAEQYA GLGHSVHWES IKALKEERRR KRKERDEALQ EEANKRKAAK1140
 1141 TAEAKANGEG DEHKKALSLL EEGILQWCEQ MQKGTKHLEE LLGGREGWEE MMRQSKEENK1200
 1201 GLTEAEIRKK SLRWWLEDQI KKGLVTEEER KQMEEAFLAD AKGLTSVKAT GLKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle