YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ1_NEUCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLRTGAASV VRTGLGLTQS RCAVQSLTAV PLERRIRQSK AFYHNTKKND SAWAAAVSVA  60
   61 GNIVNNAVTK AIKGTDGLPT IDPLRLVAGE MKFLTGNIRK LLGSGHPSLD RAAKYYTQAE 120
  121 GKHVRPLIVL LMSRATALCP KAPQRQQSTL QASAAIDTSI SPLNILSDFN PSDATPVSIP 180
  181 ADTDILPSQR RLAEITELIH TASLLHDDVI DHSESRRGAP SANLEFGNKM AVLAGDFLLG 240
  241 RASVALARLR HAEVVELLAT VIANLVEGEF MQLKNTARDE KNPKWSEETL TYYLQKTYLK 300
  301 TASLISKSCR ASALLGGADA ATVDAAYLYG KNLGLAFQLV DDMLDYTRSE KELGKPAGAD 360
  361 LELGLATAPL LFAWKTMPEL GPLVGRKFEK EGDAARAREL VLQSNGIEQT RALAQDYAEK 420
  421 AIEAISGFPD SEAKDGLIEM AVKTLKRNK

Type	Start	End	Confidence
Signal Peptide	1	22	0.70
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	449	0.99