YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14027685, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYRTLGRSG LKVSTLTLGT MTFGGTGPFA AVGNSDLGEA RRMIDMCIDA GINLIDTANV  60
   61 YSNGLSEEII GEALGGKRRN DVLIASKARM RIGSGPNDEG LSRHHLIREC EKSLKRLKTD 120
  121 VIDIYFVHQW DGLTPVEETV AALDTLVNQG KVRYIGCSNW SGWQVMKALS ISDSRHQQRF 180
  181 VTQQIHYTLE AREAEYELLP ISVDQGLGVL VWSPLAGGLL SGKYHRDSPT ARQLAGWSEP 240
  241 PIRDEDRLWR IVDVLVEIGK ARGVSAAQVA LAWLLGRPAV SSLVIGARND AQLKDNLAAA 300
  301 SLALSPEERQ RLDAVSRPPV LYPYWHQQLT AKDRFGPADM VLDRSVI

Type	Start	End	Confidence
Signal Peptide	1	30	0.40
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	347	0.97