YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14027202, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVAEKSQKK SGGLGETVSV IVQALLLALV IRTLLFQPFS IPSGSMRPTL LEGDYLFVTK  60
   61 WSYGYSRYSL PFGPDLFSGR IWGSEPKRGD VVVFKFPPDP SVDYIKRVVG LPGDKIQMKN 120
  121 GQLFINGVGV PRVKTGQIDN PDITEMPQPI DVYRETLPNG VSYDTLDLNP NSIGDNTREF 180
  181 DVPPGHYFMM GDNRDNSADS RFTVGYVPAE NLVGRANLVF FSIAGKASPL EIWKWPSLMR 240
  241 VSRLFHFVN

Type	Start	End	Confidence
Cytoplasmic	1	12	0.87
Transmembrane Helix	13	36	0.80
Non-Cytoplasmic	37	249	0.95