YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14025414, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASRLIILS VAVAAAGGAG YVAKNMVAAP PPQIVVDSGP QAPAVPLQDV LVLSGDVAMG  60
   61 NALQNNISWQ SWPADGVNAN FITKANAPDA LEKLKGSIAR VPMYAGEPVR RSKLIGEGQS 120
  121 FMSSILPSGM RAVATTISAD TSAGGFILPN DFVDVIMTRR ADANSGSTGF NTETILKNIR 180
  181 VLAIDQTIQE DEEGKKTRVG QTATLELTPK QAEIITVAQQ MADRLTLALR AVADTQEKNV 240
  241 GEADYLVSGN GRKGTVRLIK SGEVSEVGAR K

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	271	0.99