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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13474564, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTGNNKVEA GNQITQGSLV SRRNVLLGGT TLAAASALAG SNPIRLAQAA AAGSKPNILV  60
   61 IFGDDIGYWN TSAYNRGMMG YRTPNIDRIA REGAIFTDLY AQQSCTAGRA AFITGQSCFR 120
  121 TGLLKVGLPA APEGLSGKDP TLAELLKPQG YATGQFGKNH VGDRNEFLPT VHGFDEFFGN 180
  181 LYHLNAEEEP ENVDYPKNPE FHAKFGPRGV LKCTATETDD PTEDPRFGRV GKQKIEDTGP 240
  241 LTKKRMETVD EEFLGAAKDF IDRQHKASKP FFCWFNSTRM HINTHLKPAS EGKTGLGMEA 300
  301 DGMVELDGMV GQLLQQLDDL GIADNTIVLW TTDNGAEVFS WPDGGTTPFH GEKNTSWEGG 360
  361 YRVPGMIRWP GVVKPGTEIN DIVSHEDWVP TLVAAAGEPN VKEKLLTGYE AAGKTFKVHL 420
  421 DGYDQHDLLA GTGPDPRKEF FYWTDEGNLA AFRYDRWKIL FLEQRAEGFD VWEEPFVALR 480
  481 VPKIFDVRAD PFERAQREAA EYVRWRFDRT YVLMPAQAFV GQHLQSFVAF PPRQKPGSFS 540
  541 LGQVLEKLQE AGNSGKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle