YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14024919, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVRFALLGA GRIGKVHARA VGSNPDAKLV AVADAFEKAA KELASAYGAE VRTIDAIEKS  60
   61 KDIDAVVICT PTDTHADLIE RFAKAGKAIF CEKPIDLNVK RVEKCLAVVE KAKATLMVGF 120
  121 NRRFDPHFAA VRKAIDDGAI GTVEMVTITS RDPGAPPIDY IKRSGGIFRD MTIHDFDMAR 180
  181 FLLGEEPVAV SAHASVLVDK KIGEAGDFDS VSVILETASG KQAVISNSRR ATYGYDQRIE 240
  241 VHGSKGMIAA ENQRPVSIEL ANEKGYTRPP LHDFFMTRYL DAYAIEIASF IAAATSGKKA 300
  301 APSGADGLVA LKLADAALKS ATTGKTVRLD K

Type	Start	End	Confidence
Signal Peptide	1	18	0.68
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	331	0.99