YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13473609, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSPATREF ARRERPLSPH LTIYRPPITM TMSIIHRITG GALYFGTLLV AIWLMAAASS  60
   61 QATFDWVNWA FGTWLGRLIL FGYTWALMHH MLGGVRHLVW DTGAGLEKHT ASKIAWATLV 120
  121 GSVLLTLLIW IAGYMARGA

Type	Start	End	Confidence
Cytoplasmic	1	34	0.91
Transmembrane Helix	35	57	0.86
Non-Cytoplasmic	58	72	0.70
Transmembrane Helix	73	93	0.85
Cytoplasmic	94	113	0.75
Transmembrane Helix	114	134	0.95
Non-Cytoplasmic	135	139	0.73