YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13473052, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPMFEKIA LVGIGLIGSS LARVIRREGL AGHVAISTRS ATTLKRAEEL GLGDSYTTDA  60
   61 KEAVRDADLV IVSVPVGSSG AVAEEIAPAL KKGAILTDVG STKASVIAQM QPHVPDGVHF 120
  121 IPGHPLAGTE KSGPDAGFAD LFDNRWCIFT PLPGTDPEAL ERLSEFWRRC GANIDTMDPQ 180
  181 HHDMTLAIVS HLPHIIAYNI VGTADDLESV TKTEVIKYSA SGFRDFTRLA ASDPTMWRDV 240
  241 CLHNKDAILE MLARFSEDLA FLQRAIRWGD GDKLFDLFTR TRAVRRSIIE AGQDIDVPDF 300
  301 GRQAVEHPSK N

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	311	0.99