YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13472581, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVEQLQPR KGPSLVVQGA MLLVVTAAAI GMGWMSGGYL KGAGAPSSVP VAPENEGKVA  60
   61 EPDAAQQPGT GPTLVALAPI TTNIASPADT WIRMEVSVVY DAPQPPAMTE DIHQDLLAFV 120
  121 RTVKMHQIEG ASGYQHLKAD IEERASIRSQ GHAKQVLIRT LLLE

Type	Start	End	Confidence
Cytoplasmic	1	14	0.57
Transmembrane Helix	15	38	0.69
Non-Cytoplasmic	39	164	0.63