YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13471340, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTIPTKAR AVIIGGGVSG CSVAYHLAKL GWTDIVLLER KQLTSGTTWH AAGLIGQLRG  60
   61 SQNMTRLAKY SADLYVKLEA ETEVGTGMRQ VGSITVALTE ERKHEIYRQA SLARAFDVDV 120
  121 REISPNEVKE MYPHLNVSDV VGAVHLPLDG QCDPANIAMA LAKGARQRGA TIVENVKVTK 180
  181 VHTRDGRVTG VSWAQGDEQG MIEADIVVNC AGMWARELGA QNGVTIPLHA CEHFYLVTEP 240
  241 IPGLSRLPVL RVPDECAYYK EDAGKMMLGA FEPVAKPWGM DGIREDFCFD QLPEDMDHFE 300
  301 PILEMGVNRM PMLATAGIHT FFNGPESFTP DDRYYLGEAP ELRGYWMATG YNSIGIVSSG 360
  361 GAGMALAQWI NDGEAPFDLW EVDIRRAQPF QKNRRYLKQR VSETLGLLYA DHFPYRQMAT 420
  421 SRGVRRSPLH EHLKARGAVF GEVAGWERAN WFAREGQERE YRYSWKRQNW FDNQREEHLA 480
  481 VRNKVGLFDM TSFGKIRVEG RDACAFLQRL CANDMDVAPG KIIYTQMLNQ RGGIESDLTV 540
  541 SRLSDTAYFL VVPGATLQRD LAWLRRHVGE EFVVITDVTA AESVLCLMGP DARKLIQKVS 600
  601 PNDFSNENNP FGTFQEIEIG MGLARAHRVT YVGELGWELY VSTDQAAHIF EAIDEAGADV 660
  661 GLKLCGLHTL DSCRIEKAFR HFGHDITDED NVLEAGLGFA VKTAKGDFIG RDAVLKKKDA 720
  721 GLNRRLVQFR LKDPQPLLFH NEAILRDGRI VGPITSGNYG HHLGGAIGLG YVPCPGESEA 780
  781 DVLASSYEIE IAGERFAAEA SLKPMYDPKA ERVKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle