YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14022068, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARGMKYIV FILFTVMTNA AAQLMLKQGM MSLGPISFEG VNPLFKLLQI VFSPWVFLGL  60
   61 CTFVISMASH LYVLSKVELS FAYPFLSLAY VAVAIFAYFV FREDINGWRI AGIAFICVGT 120
  121 VLIAQSGRGH EDQTASITPD KTQISETVR

Type	Start	End	Confidence
Cytoplasmic	1	7	0.88
Transmembrane Helix	8	26	0.95
Non-Cytoplasmic	27	50	0.80
Transmembrane Helix	51	73	0.89
Cytoplasmic	74	80	0.78
Transmembrane Helix	81	101	0.94
Non-Cytoplasmic	102	106	0.83
Transmembrane Helix	107	127	0.88
Cytoplasmic	128	149	0.89