YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13470422, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPSAPIAS VPVSKASNAR KPAEIAPEDG PDRPFGLAEE ETVALSAPAL PDNVDPPVEP  60
   61 AALVSPPKLL SRAAPAMLAG PVTRYGFRDA KPINFGRSSP RHLAVHGVDV SRWQGDVNWE 120
  121 KLRAQGANFA YIKATDGGDH LDPMFMRNWR NADAAGLKRG AYHFFYWCRT AGEQADWFIR 180
  181 NVPKVDGALP PVIDVEWNGD SSCKRRPSRE KVLEKMQVFM DKLERHYGQR PIIYTSPDFY 240
  241 RDNLQGAFLD YPFWLRAVAR HPSKVYPGRK WLFWQYSGSG LSHGVTGRVD LNVFHGDERQ 300
  301 WRAWAGGGGR QMMADAD

Type	Start	End	Confidence
Signal Peptide	1	16	0.53
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	317	0.99